FastQCFastQC Report
Sat 13 Aug 2016
DRR028642_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDRR028642_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136517923
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA284850.07.46900651
ATCGGAA334700.06.54956152
TCGGAAG423450.05.29591463
CGGAAGA465550.05.11319264
Produced by FastQC (version 0.11.5)