Left reads: Input : 18738169 Mapped : 15881275 (84.8% of input) of these: 627956 ( 4.0%) have multiple alignments (112867 have >20) Right reads: Input : 18738169 Mapped : 15449388 (82.4% of input) of these: 611187 ( 4.0%) have multiple alignments (112867 have >20) 83.6% overall read mapping rate. Aligned pairs: 14900841 of these: 585559 ( 3.9%) have multiple alignments 199152 ( 1.3%) are discordant alignments 78.5% concordant pair alignment rate.