Left reads: Input : 16341332 Mapped : 13824523 (84.6% of input) of these: 561627 ( 4.1%) have multiple alignments (25917 have >20) Right reads: Input : 16341332 Mapped : 13534276 (82.8% of input) of these: 549910 ( 4.1%) have multiple alignments (25919 have >20) 83.7% overall read mapping rate. Aligned pairs: 13099242 of these: 525370 ( 4.0%) have multiple alignments 100166 ( 0.8%) are discordant alignments 79.5% concordant pair alignment rate.